Molecule Title To Field¶
This cube extracts molecule titles into a new field.
The molecule is read from the field specified by the Molecule Field parameter. Its title is read, and is then written to a field specified by the Title Field parameter. The Fail On Empty Title parameter controls the behavior if the molecule’s title is empty, the default behavior being to send such records to the success port.
Parameter Details¶
Calculation Parameters¶
CPUs (integer) : The number of CPUs to run this cube withDefault: 1 Min: 1 Max: 128
Cube Metrics (string) : Set of metrics to be collectedChoices: cpu, disk, memory, network
Temporary Disk Space (MiB) (decimal) : The minimum amount of disk space in MiB (1048576 B) this cube requires. Due to overhead, request a couple hundred MiB more than required.Default: 5120.0 Min: 128.0 Max: 8589934592
Fail On Empty Title (boolean) : Send records whose molecules have no title to the failure portDefault: False
GPUs (integer) : The number of GPUs to run this cube withDefault: 0 Max: 16
Instance Tags (string) : Only run on machines with matching tags (comma separated)Default: “”
Instance Type (string) : The type of instance that this cube needs to be run on
Memory (MiB) (decimal) : The minimum amount of memory in MiBs (1048576 B) this cube requires. Due to overhead, request a couple hundred MiB more than required.Default: 1800 Min: 256.0 Max: 8589934592
Metric Period (decimal) : How often to sample metrics, in secondsDefault: 60 Min: 1 Max: 300
Spot policy (string) : Control cube placement on spot market instancesDefault: ProhibitedChoices: Allowed, Preferred, NotPreferred, Prohibited, Required
Field parameters¶
Molecule Field (Field Type: Chem.Mol) :
Title Field (Field Type: String) : Field in which to place Title of MoleculeDefault: Title
Hardware Parameters¶
Machine hardware requirements
Memory (MiB) (decimal) : The minimum amount of memory in MiBs (1048576 B) this cube requires. Due to overhead, request a couple hundred MiB more than required.Default: 1800 Min: 256.0 Max: 8589934592
Temporary Disk Space (MiB) (decimal) : The minimum amount of disk space in MiB (1048576 B) this cube requires. Due to overhead, request a couple hundred MiB more than required.Default: 5120.0 Min: 128.0 Max: 8589934592
GPUs (integer) : The number of GPUs to run this cube withDefault: 0 Max: 16
CPUs (integer) : The number of CPUs to run this cube withDefault: 1 Min: 1 Max: 128
Instance Type (string) : The type of instance that this cube needs to be run on
Spot policy (string) : Control cube placement on spot market instancesDefault: ProhibitedChoices: Allowed, Preferred, NotPreferred, Prohibited, Required
Instance Tags (string) : Only run on machines with matching tags (comma separated)Default: “”
Metrics Parameters¶
Cube Metric Parameters
Metric Period (decimal) : How often to sample metrics, in secondsDefault: 60 Min: 1 Max: 300
Cube Metrics (string) : Set of metrics to be collectedChoices: cpu, disk, memory, network
Tip
filename: snowball/logic/mol_title_to_field.py