Data Page
Easily Filter Your Datasets from Web Interface (April 26, 2022)
3D Modeling Page
Easily Filter Your Datasets from Web Interface (April 26, 2022)
Pausing and Resuming Your Work (June 1, 2022)
Enabling and Modifying Receptor Constraints (June 6, 2023)
Filter Docked Poses Using Interaction Type (August 17, 2023)
Extracting the Smallest Binding Unit from a Design Unit (January 31, 2024)
Analyze Page
Give Your Molecules Stars with Hot Keys (January 30, 2023)
Track Data Source at a Glance (March 1, 2023)
Easily Filter Your Datasets from Web Interface (April 26, 2022)
Create Snapshots and Save or Share Orion Sessions (April 6, 2023)
Filter Docked Poses Using Interaction Type (August 17, 2023)
Floe Page
Compute Your Savings (September 16, 2021)
Automate Protein Structures Preparation and Selection Process (November 23, 2021)
Shortcut to Save You Time (December 15, 2021)
Combining Ligand- and Structure-Based Design Now Is Even Easier (February 22, 2022)
Compare Ligand Binding Sites Against Ready Database of Protein Sites (March 30, 2022)
Shape Searching: Differences Between the Batch FastROCS™ and FastROCS Plus floes (May 3, 2023)
Preparing Apo Proteins as Model-Ready Protein Structures (October 20, 2023)
How to Extract Proteins, Ligands, and Other Components from Design Units (December 22, 2023)
Extracting the Smallest Binding Unit from a Design Unit (January 31, 2024)
Access and Utility of Non-Dataset Files in Orion® (May 30, 2024)
How to Change the Output Name When Running Floes (July 18, 2024)
Improving Predictions for Diverse Chemotypes and Flexible Proteins (August 28, 2024)
Miscellaneous Tips
Assessing Structural Quality of Protein-Ligand Complexes (January 25, 2022)
OpenEye Glossary of Terms
Bibliography
Legal Notices
Legal Notices
Copyright and Trademarks
Sample Code
Citation
Technology Licensing
GCC
Orion Tips
All OpenEye Documentation
»
Contents
»
Index
Index
Symbols
|
A
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
J
|
K
|
L
|
M
|
N
|
O
|
P
|
R
|
S
|
T
|
V
|
Z
Symbols
3D Modeling page
,
[1]
,
[2]
,
[3]
,
[4]
,
[5]
,
[6]
3D modeling page
A
AlphaFold2
AMI
Analyze page
,
[1]
,
[2]
,
[3]
,
[4]
,
[5]
apo protein
apo proteins
apoprotein
protein preparation
asymmetric unit
AUC
B
B-factor
BAR
biological unit
Biomodeler
bug-fix release
C
canonical isomeric SMILES
canonical SMILES
chiral atom
chiral bond
CIP
collection
search
color
data
conformer
conformers
conversion
design unit
cost
floe
CPK
CSV
cube
cubes
CUDA
CXSMILES
D
data
color
dataset
filtering
design unit
,
[1]
,
[2]
,
[3]
conversion
dock
docked poses
docking
E
excipient
F
FASTA
FastROCS
,
[1]
feature release
file-name
output
files
non-dataset
filtering
dataset
fingerprint
floe
cost
Floe page
,
[1]
,
[2]
,
[3]
,
[4]
,
[5]
,
[6]
,
[7]
,
[8]
,
[9]
,
[10]
floes
G
GRASP
Guide to Pharmacology
H
hit lists
hot
keys
I
in-memory
InChI
InChIKey
induced-fit posing
Iridium
,
[1]
J
JSON
K
keys
hot
L
LINGO
link
shareable
snapshot
M
MACCS
MakeReceptor
marching cubes
memory-mapped
module
modules
MOL
molecules
select
Monte Carlo
multiple
protein target in shape search
N
non-dataset
files
nonterminal atom
O
OEB
Orion back end
Orion Platform
output
file-name
P
package
packages
pausing
popcount
preliminary API
preparation
apoprotein, protein
protein
project
protein
preparation
preparation apoprotein
protein target in shape search
multiple
single
R
raster image
ratings
star
receptor
receptor constraints
receptors
resuming
ROC curve
rotatable bond
S
savings
script
scripts
SDF
search
collection
SiteHopper
select
molecules
shape searches
shard
shareable
link
single
protein target in shape search
SiteHopper
search
SMARTS
SMILES
SMIRKS
snapshot
link
SPRUCE
Spruce
,
[1]
stable API
star
ratings
stereo atom
stereo bond
structural key
SVG
T
Tanimoto
Tile View
V
vector image
Z
zwitterion
zwitterionic