Java and C++ FastROCS TK API points are currently intended to be used only for toolkit functionality and not client-server functionality. The Python API should be used if client-server utilities are needed.
A new OEShapeDatabasePrep function has been added to provide the same functionality as the shapedatabaseprep example, except as a multi-threaded function. This should improve performance when prepping databases on systems with multiple cores. This function is non-deterministic, so molecules will not appear in the same order as the input file.