API¶
OEChem API¶
- OEChem Classes
- OE2DRingDictionary
- OE2DRingDictionaryCreatorOptions
- OE3DMolStyle
- OEAbsCanonicalConfTest
- OEAbsoluteConfTest
- OEAnisoUij
- OEAtomBase
- OEAtomBondSet
- OEAtomIsInAgent
- OEAtomIsInChain
- OEAtomIsInProduct
- OEAtomIsInReactant
- OEAtomIsInResidue
- OEAtomIsInRing
- OEBondBase
- OEBondIsInChain
- OEBondIsInRing
- OECliqueSearch
- OEConfBase
- OEConfRMSD
- OEConfRMSDOptions
- OEConfTestBase
- OEConstCoords
- OECoordArray
- OECreateSubSearchDatabaseOptions
- OECSVHeader
- OEDefaultConfTest
- OEEuler
- OEExprBase
- OEExtractRingTemplateOptions
- OEFileStringParameter
- OEFuzzy
- OEGetNbrAtom
- OEGraphMol
- OEGroupBase
- OEHasAlphaBetaUnsat
- OEHasAnisou
- OEHasAtomicNum
- OEHasAtomInGroup
- OEHasAtomName
- OEHasAtomStereoSpecified
- OEHasBondInGroup
- OEHasBondStereoSpecified
- OEHasChainID
- OEHasFormalCharge
- OEHasFragmentNumber
- OEHasGroupType
- OEHasHvyDegree
- OEHasIdx
- OEHasMapIdx
- OEHasOrder
- OEHasResidueNumber
- OEHydrogenCounter
- OEIdxSelected
- OEInChIOptions
- OEInSamePart
- OEIsAromaticAtom
- OEIsAromaticBond
- OEIsAtomHybridization
- OEIsBridgeHead
- OEIsCAlpha
- OEIsCarbon
- OEIsChiralAtom
- OEIsChiralBond
- OEIsHalide
- OEIsHalogen
- OEIsHeavy
- OEIsHetero
- OEIsHydrogen
- OEIsInvertibleNitrogen
- OEIsMDLStereoGroup
- OEIsMember
- OEIsMemberPtr
- OEIsMetal
- OEIsNitrogen
- OEIsNonRingAtomDoubleBondedToRing
- OEIsomericConfTest
- OEIsOxygen
- OEIsPhosphorus
- OEIsPolar
- OEIsPolarHydrogen
- OEIsProductGroup
- OEIsReactantGroup
- OEIsRGroup
- OEIsRotor
- OEIsRxnComponentGroup
- OEIsSulfur
- OEIsTermHeavyAtom
- OEIsValidAtomValence
- OEIsValidMDLAtomValence
- OELibraryGen
- OELingoSim
- OEMatch
- OEMatchBase
- OEMatchFunc
- OEMatchPair
- OEMCMolBase
- OEMCSFunc
- OEMCSFuncParameter
- OEMCSMaxAtoms
- OEMCSMaxAtomsCompleteCycles
- OEMCSMaxBonds
- OEMCSMaxBondsCompleteCycles
- OEMCSSearch
- OEMMFFTypeResult
- OEMol
- OEMolBase
- OEMolDatabase
- OEMolDatabaseSaveOptions
- OEMolDBException
- OEMolGDPropertyFxn
- oemolistream
- oemolithread
- oemolostream
- oemolothread
- OEMolParameter
- OEMolReaderParameter
- OEMolWriterParameter
- OEMolPropertyFxn
- OEMolPropertyList
- OEMolRecord
- OEMolSDPropertyFxn
- oemolstreambase
- OEMolStyleColorer
- OEMolTaggedPropertyFxn
- oemolthreadbase
- OEMutableCoords
- OENbrs
- OENearestNbrs
- OENthAtom
- OEOmegaConfTest
- OEOutFileStringParameter
- OEParseSmilesOptions
- OEPartPredT
- OEPredicateParameter
- OEQAtomBase
- OEQBase
- OEQBondBase
- OEQMol
- OEQMolBase
- OEQuaternion
- OERefInputAppOptions
- OEResidue
- OERotMatrix
- OESDDataPair
- OESimilarByRMSD
- OESimpleAppOptions
- OESubSearch
- OESubSearchDatabase
- OESubSearchQuery
- OESubSearchResult
- OESubSearchScreen
- OESubSearchScreenTypeBase
- OETokenizerBase
- OETorsion
- OETrans
- OETransBase
- OETranslation
- OEUnaryToBinaryAnd
- OEUnaryToBinaryOr
- OEUnAtomPredParameter
- OEUnBondPredParameter
- OEUniMolecularRxn
- OEUniMolecularRxnOptions
- OEVectorBindings
- OEChem Constants
- OEChem
- Preliminary OEChem Constants
- OEAroModel
- OEAtomColorScheme
- OEAtomLabelScheme
- OEAtomStereo
- OEAtomStyle
- OEBaseColorScheme
- OEBondStereo
- OECIPAtomStereo
- OECIPBondStereo
- OEContourStyle
- OECoordsType
- OEElemNo
- OEExprOpts
- OEExprType
- OEFileStringType
- OEFileStringTypeFlavor
- OEFormat
- OEFuzzVal
- OEGroupType
- OEHybridization
- OEHydrogenVisibility
- OEIFlavor
- OEInteractionStyle
- OELingoType
- OEMCMolType
- OEMCSType
- OEMDLQueryOpts
- OEMMFFType
- OEMModType
- OEMolBaseType
- OENearestNbrsMethod
- OEOFlavor
- OEPDBAtomName
- OEPerceived
- OEPreserveResInfo
- OEProperty
- OEProteinColorScheme
- OEProteinStyle
- OEQMolType
- OERadiiType
- OEResidueIndex
- OERxnRole
- OESLNFlag
- OESmartsParseOpts
- OESMILESFlag
- OEStyleGridType
- OESubSearchDatabaseType
- OESubSearchScreenType
- OESubSearchStatus
- OESurfaceColorScheme
- OESurfaceStyle
- OESurfaceType
- OETriposType
- OEUncolorStrategy
- OEUniMolecularRxnFixValence
- OEWriteMolReturnCode
- OEZap7Version
- OEZap9Version
- OEChem Functions
- OE3DToAtomStereo
- OE3DToBondStereo
- OE3DToInternalStereo
- OEAcyclicPath
- OEAddCustomFASTAResidue
- OEAddExplicitHydrogens
- OEAddMMCIFData
- OEAddMols
- OEAddMolStyles
- OEAddPDBData
- OEAddSDData
- OEApplyStyleChange
- OEAssignAromaticFlags
- OEAssignBondiVdWRadii
- OEAssignCovalentRadii
- OEAssignDelphiRadii
- OEAssignFormalCharges
- OEAssignHonigIonicCavityRadii
- OEAssignHybridization
- OEAssignImplicitHydrogens
- OEAssignMDLHydrogens
- OEAssignPaulingVdWRadii
- OEAssignRadii
- OEAssignResidueNumbers
- OEAssignSerialNumbers
- OEAssignZap7Radii
- OEAssignZap9Radii
- OEAtomGetMDLParity
- OEAtomGetResidue
- OEAtomGetSmallestRingSize
- OEAtomIsInAromaticRingSize
- OEAtomIsInRingSize
- OEAtomSetMDLParity
- OEAtomSetResidue
- OEBAtomIntTypeOpts
- OEBDefaultOpts
- OEBGZipCompressOpts
- OEBondGetSmallestRingSize
- OEBondIsInAromaticRingSize
- OEBondIsInRingSize
- OEBRotCompressOpts
- OEBuildMDLQueryExpressions
- OECalcCartesianCoord
- OECalcInternalCoord
- OECalcPMI
- OECalculateMolecularWeight
- OECanonicalOrderAtoms
- OECanonicalOrderBonds
- OECenter
- OECheckAtomValence
- OECheckAtomValences
- OEChemGetArch
- OEChemGetLicensee
- OEChemGetPlatform
- OEChemGetRelease
- OEChemGetSite
- OEChemGetVersion
- OEChemIsLicensed
- OEClear2DRingDictionary
- OEClearAromaticFlags
- OEClearChiralPerception
- OEClearMMCIFData
- OEClearPartialCharges
- OEClearPDBData
- OEClearResidue
- OEClearResidues
- OEClearRotorCompressData
- OEClearSDData
- OEClearStyle
- OECopyMMCIFData
- OECopyMol
- OECopyPDBData
- OECopySDData
- OECorrectAcidProtonGeometry
- OECount
- OECreateAbsSmiString
- OECreateCanSmiString
- OECreateCSVHeader
- OECreateInChIKey
- OECreateInChI
- OECreateIsoSmiString
- OECreateMolDatabaseIdx
- OECreateSlnString
- OECreateSmiString
- OECreateSubSearchDatabaseFile
- OEDefaultImplicitHCount
- OEDefaultMDLHCount
- OEDeleteEverythingExceptTheFirstLargestComponent
- OEDeletePDBData
- OEDeleteSDData
- OEDetermineAromaticRingSystems
- OEDetermineComponents
- OEDetermineConnectivity
- OEDetermineReactants
- OEDetermineRingSystems
- OEDisassembleExpressions
- OEDoubleBondCount
- OEDoubleBondOCount
- OEElementHistogram
- OEEulerRotate
- OEExactGraphMatch
- OEExpandSuperAtoms
- OEExtractRingTemplates
- OEFastaToMol
- OEFindRingAtomsAndBonds
- OEFormalPartialCharges
- OEGasteigerInitialCharges
- OEGasteigerPartialCharges
- OEGenerate2DCoordinates
- OEGetAbsTorsion
- OEGetAminoAcidCode
- OEGetAngle
- OEGetAnisou
- OEGetAtomColor
- OEGetAtomComment
- OEGetAtomLabelColor
- OEGetAtomLabelText
- OEGetAtomicNum
- OEGetAtomicSymbol
- OEGetAutomorphs
- OEGetAverageWeight
- OEGetBondiVdWRadius
- OEGetCenterAndExtents
- OEGetCenterOfMass
- OEGetColorSchemeName
- OEGetComment
- OEGetCovalentRadius
- OEGetDefaultIFlavor
- OEGetDefaultOFlavor
- OEGetDefaultMass
- OEGetDelphiRadius
- OEGetDimensionFromCoords
- OEGetDistance2
- OEGetDistance
- OEGetDoubleBondNeighbor
- OEGetFileExtension
- OEGetFileType
- OEGetFormatExtension
- OEGetFormatString
- OEGetHonigIonicCavityRadius
- OEGetHybridization
- OEGetHydrogenCounts
- OEGetIsotopicWeight
- OEGetMCSExhaustiveSearchTruncationLimit
- OEGetMDLDimensionFromCoords
- OEGetMolDatabaseIdxFileName
- OEGetMolDBIdx
- OEGetNearestNbrs
- OEGetMMCIFData
- OEGetOEGraphMol
- OEGetOEMol
- OEGetOEQMol
- OEGetOtherNeighbor
- OEGetPackedCoords
- OEGetPathLength
- OEGetPaulingVdWRadius
- OEGetPDBAtomIndex
- OEGetPDBAtomName
- OEGetPDBBaseData
- OEGetPDBDataPairs
- OEGetPDBData
- OEGetRadiiTypeName
- OEGetRadiusOfGyration
- OEGetResidueIndex
- OEGetResidueIndexFromCode
- OEGetResidueName
- OEGetSDBaseData
- OEGetSDDataPairs
- OEGetSDData
- OEGetSingleBondNeighbor
- OEGetSmallestSubtree
- OEGetSmiStringOrder
- OEGetSoleBond
- OEGetSoleDoubleBond
- OEGetSoleNeighbor
- OEGetSoleSingleBond
- OEGetSoleTripleBond
- OEGetStyle
- OEGetStyleChange
- OEGetStyleIndex
- OEGetSubSearchScreenType
- OEGetSubtree
- OEGetTokenizer
- OEGetTorsion
- OEGetTorsions
- OEGetTripleBondNeighbor
- OEGetUniMolecularRxnIter
- OEHasAtomStereoHydrogens
- OEHasBondStereoHydrogens
- OEHasDoubleBondO
- OEHasDoubleBond
- OEHasExplicitHydrogens
- OEHasExplicitHydrogenExpression
- OEHasImplicitHydrogens
- OEHasImplicitHydrogenExpression
- OEHasMMCIFData
- OEHasMolDBIdx
- OEHasMultipleBond
- OEHasPartialCharges
- OEHasPDBData
- OEHasResidue
- OEHasResidues
- OEHasSDData
- OEHasSingleBond
- OEHasStereoHydrogens
- OEHasStyle
- OEHasTokenizer
- OEHasTripleBond
- OEHistogramFormula
- OEInChIToMol
- OEInit2DRingDictionary
- OEInitDefaultHandler
- OEInitHandler
- OEInvertCenter
- OEIs2DFormat
- OEIs3DFormat
- OEIsBinary
- OEIsCommonIsotope
- OEIsComplementaryScreenType
- OEIsExtension
- OEIsGZip
- OEIsReadable
- OEIsSDDataFormat
- OEIsTerminalOxygen
- OEIsTerminalSulfur
- OEIsValid2DRingDictionary
- OEIsValidSubSearchDatabase
- OEIsValidSubSearchScreenString
- OEIsWriteable
- OEKekulize
- OEMacroModelAtomTypeNames
- OEMacroModelAtomTypes
- OEMacroModelTypeElement
- OEMacroModelTypeName
- OEMacroModelTypeNames
- OEMakeSubSearchQueryScreen
- OEMakeSubSearchTargetScreen
- OEMDLClearBondStereo
- OEMDLClearParity
- OEMDLCorrectBondStereo
- OEMDLGetParity
- OEMDLGetValence
- OEMDLHasIncorrectBondStereo
- OEMDLHasParity
- OEMDLPerceiveBondStereo
- OEMDLPerceiveParity
- OEMDLSetParity
- OEMDLStereoFromBondStereo
- OEMDLStereoFromParity
- OEMMFF94InitialCharges
- OEMMFF94PartialCharges
- OEMMFFAtomTypeNames
- OEMMFFAtomType
- OEMMFFAtomTypes
- OEMMFFClearRemappedElements
- OEMMFFRemapElement
- OEMMFFTypeIndex
- OEMMFFTypeName
- OEMMFFTypeNames
- OEMolecularFormula
- OEMolToInChIKey
- OEMolToInChI
- OEMolToCXSMILES
- OEMolToSmiles
- OEMolToSTDInChIKey
- OEMolToSTDInChI
- OEMultipleBondCount
- OENetCharge
- OENewMCMolBase
- OENewMolBase
- OENewQMolBase
- OENormalize
- OEOverlayConfsByRMSD
- OEParseInChI
- OEParseSmarts
- OEParseSmiles
- OEParseSmirks
- OEPDBOrderAtoms
- OEPerceiveBondOrders
- OEPerceiveChiral
- OEPerceiveCIPStereo
- OEPerceiveResidues
- OEPerceiveSymmetry
- OEPRECompress
- OEPrepareSearch
- OEPreserveRotCompress
- OERandomizeTorsions
- OEReadCDXFile
- OEReadCIFFile
- OEReadCSVFile
- OEReadCSVHeader
- OEReadFASTAFile
- OEReadMacroModelFile
- OEReadMDLFile
- OEReadMDLQueryFile
- OEReadMDLReactionQueryFile
- OEReadMol2File
- OEReadMolecule
- OEReadMolFromByteArray
- OEReadMOPACFile
- OEReadOEBFile
- OEReadPDBFile
- OEReadRxnFile
- OEReadSketchFile
- OEReadXYZFile
- OEResidueHydrogens
- OEResidueToString
- OERGroupsToHydrogens
- OERingBondCount
- OERMSD
- OERotate
- OESameChain
- OESameResidue
- OESameSubSearchScreenTypes
- OEScrambleMolecule
- OEScreen
- OESet2DHydrogenGeom
- OESet3DHydrogenGeom
- OESetAngle
- OESetAnisou
- OESetAtomComment
- OESetCIPStereo
- OESetComment
- OESetDefaultFlavors
- OESetDefaultIFlavors
- OESetDefaultOFlavors
- OESetDimensionFromCoords
- OESetDistance
- OESetMCSExhaustiveSearchTruncationLimit
- OESetMDLDimensionFromCoords
- OESetMMCIFData
- OESetOEGraphMol
- OESetOEMol
- OESetOEQMol
- OESetPackedCoords
- OESetPDBData
- OESetSDData
- OESetStyle
- OESetStyleIndex
- OESetTorsion
- OEShortestPath
- OESingleBondCount
- OESmartsLexReplace
- OESmilesAtomCount
- OESweepStyles
- OECXSMILESToMol
- OESmilesToMol
- OESortConfsBySDTag
- OESortConfsByTag
- OEString2OEAtomExpr
- OEString2OEBondExpr
- OESubSearchStatusToName
- OESubsetMol
- OESuppressHydrogens
- OESweepRotorCompressHydrogens
- OESymmetryNumber
- OETerminalOCount
- OETerminalSCount
- OETheFunctionFormerlyKnownAsStripSalts
- OETranslate
- OETrimConformers
- OETripleBondCount
- OETriposAtomNames
- OETriposAtomTypeNames
- OETriposAtomType
- OETriposAtomTypes
- OETriposBondTypeNames
- OETriposOrderAtoms
- OETriposResonantTypeNames
- OETriposTypeElement
- OETriposTypeIndex
- OETriposTypeName
- OETriposTypeNames
- OEUncolorMol
- OEWeightedRMSD
- OEWrite2DRingDictionary
- OEWriteCDXFile
- OEWriteConstMolecule
- OEWriteCSVFile
- OEWriteCIFFile
- OEWriteCSVHeader
- OEWriteFASTAFile
- OEWriteMacroModelFile
- OEWriteMDLFile
- OEWriteMol2File
- OEWriteMolecule
- OEWriteMolToByteArray
- OEWriteMOPACInputFile
- OEWritePDBFile
- OEWriteXYZFile
Preliminary OEChem API¶
OESystem API¶
- OESystem Classes
- IsFalse
- IsTrue
- OEAnd
- OEAnnotation
- OEBInitializer
- OEBase
- OEBaseData
- OEBaseDataT
- OEBaseDataTPtr
- OEBinaryAnd
- OEBinaryFalse
- OEBinaryFunction
- OEBinaryIOHandler
- OEBinaryIOHandlerBase
- OEBinaryNot
- OEBinaryOr
- OEBinaryPredicate
- OEBinaryTrue
- OEBitVector
- OEBoundedBuffer
- OEColor
- OEColorGradientBase
- OEColorStop
- OEConcatIter
- OEConsoleProgressTracer
- OEContainer
- OECycleTimer
- OEDots
- OEErrorHandler
- OEErrorHandlerImplBase
- OEExponentColorGradient
- OEExponentialColorGradient
- OEFixedGrid
- OEFixedMultiGrid
- OEGaussian
- OEGaussianBase
- OEGaussianContainer
- OEGaussianContainerBase
- OEGrid
- OEGridAbstractBase
- OEGridBase
- OEHasRole
- OEHeader
- OEInterface
- OEIsFalse
- OEIsTrue
- OEIter
- OEIterBase
- OELinearColorGradient
- OELogarithmicColorGradient
- OEMultiGrid
- OENot
- OEOr
- OEOwnedPtr
- OEParameter
- OEPredIter
- OEProtectedBuffer
- OERandom
- OERole
- OERoleSet
- OERoles
- OEScalarGrid
- OESharedPtr
- OESkewGrid
- OEStopwatch
- OEThreadedDots
- OETracerBase
- OETypedParameter
- OEUnaryFalse
- OEUnaryFunction
- OEUnaryPredicate
- OEUnaryTrue
- OEUnboundedBuffer
- OEUnownedPtr
- OEWallTimer
- oeprogressstream
- OESystem Constants
- OESystem Functions
- OEAddContour
- OEAddGrid
- OEAnnotateArrow
- OEAnnotateBox
- OEAnnotateCylinder
- OEAnnotateEllipsoid
- OEAnnotateLine
- OEAnnotateSphere
- OEAnnotateSpline
- OEAnnotateSplineSurface
- OEAnnotateSymbol
- OEAnnotateText
- OEAnnotateTorus
- OEAttachData
- OEBDataLengthBytes
- OEBFPosTEndian
- OEBFloatEndian
- OEBIntEndian
- OEBPeekTag
- OEBReadData
- OEBReadDataLength
- OEBReadOEBase
- OEBReadPOD
- OEBReadTag
- OEBShortEndian
- OEBWriteData
- OEBWriteDataLength
- OEBWriteOEBase
- OEBWritePOD
- OEBWriteTag
- OEBitIsPowerOf2
- OEBitVectorAnd
- OEBitVectorEqual
- OEBitVectorNot
- OEBitVectorNumBytes
- OEBitVectorNumWords
- OEBitVectorOr
- OEBitVectorSub
- OEBitVectorXor
- OECastData
- OECheckHelp
- OEClearGridBoundary
- OEColorCreate
- OEColorGet
- OEColorPacked
- OEColorSet
- OEConfigure
- OECopyArray
- OECopyBaseData
- OECopyBits
- OECount
- OEDivideGrid
- OEErrorLevelToString
- OEFileExtension
- OEFileExtensions
- OEGetBitCounts
- OEGetByteArrayFromScalarGrid
- OEGetByteArrayFromSkewGrid
- OEGetCenterAndExtents
- OEGetColors
- OEGetContourColor
- OEGetContourLevel
- OEGetContrastColors
- OEGetDataType
- OEGetDeepColors
- OEGetFileEndian
- OEGetGridFileType
- OEGetGridFormatExtension
- OEGetGridFormatString
- OEGetScalarGridFromByteArray
- OEGetSkewGridFromByteArray
- OEGetHostEndian
- OEGetKappa
- OEGetLightColors
- OEGetMemPoolMode
- OEGetOEBReturnString
- OEGetPrefactor
- OEGetRadius
- OEGetTag
- OEGetThreadSafe
- OEGetVividColors
- OEGetWidth
- OEGridAvgVal
- OEGridCopyContents
- OEGridCopyGeometry
- OEGridGetArch
- OEGridGetLicensee
- OEGridGetPlatform
- OEGridGetRelease
- OEGridGetSite
- OEGridGetVersion
- OEGridHasNonZeroValue
- OEGridIsLicensed
- OEGridMaxVal
- OEGridMinVal
- OEGridSameGeometry
- OEGridSizeMultiply
- OEGridSetAllElements
- OEHasTag
- OEInitAnnotationHandlers
- OEInitGridHandlers
- OEInitializeHandler
- OEInterpolateBetweenGrids
- OEIsEmpty
- OEIsGrid
- OEIsReadableGrid
- OEIsSafeCast
- OEIsSameTypeTester
- OEIsWriteableGrid
- OELinearInterpolate
- OEMTZMapTypeFromString
- OEMTZMapTypeToString
- OEMakeGaussians
- OEMakeGridFromCenterAndExtents
- OEMakeHex
- OEMakeMolecularGaussianGrid
- OEMakeRegularGrid
- OEMakeRegularSubGrid
- OEMakeString
- OEMaskGrid
- OEMaskGridByCoordsAndRadii
- OEMaskGridByMolecule
- OEMaskGridValues
- OEMoveArray
- OEMultiplicationWillOverflow
- OEMultiplyGrid
- OENumContours
- OENumberToString
- OEParseCommandLine
- OEParseCommandLineLW
- OEParseHex
- OEParseParameterFile
- OEReadGrid
- OEReadMTZ
- OEReadOldStyleGrid
- OERegisterMolParameters
- OERegisterOEBInitializer
- OERotate
- OESNPrintf
- OESetMemPoolMode
- OESetThreadSafe
- OESetupGrid
- OESigmaNormalizeGrid
- OEStaticGetTag
- OEStringCSVJoin
- OEStringCSVQuote
- OEStringCSVTokenize
- OEStringCollapseQuotes
- OEStringEquals
- OEStringJoin
- OEStringLower
- OEStringMatch
- OEStringSimplifyWhiteSpace
- OEStringStripQuotes
- OEStringStripWhiteSpace
- OEStringTabsToSpaces
- OEStringToNumber
- OEStringTokenize
- OEStringTokenizeQuoted
- OEStringTranslate
- OEStringUpper
- OESubtractGrid
- OETanimoto
- OETranslate
- OETrimToSigFigs
- OEUnknownOEBDataTagName
- OEWriteGrid
- OEWriteHtml
- OEWriteInterfaceConfigurationFile
- OEWriteOldStyleGrid
- OEWriteSettings
- OEBitVector Operators
Preliminary OESystem API¶
OEPlatform API¶
- OEPlatform Classes
- OECondition
- OEDirectoryScan
- OEFile
- OEHalfFloat
- OELock
- OELockCondition
- OELockSpinlock
- OEMutex
- OEOnce
- OESpinlock
- OEThread
- OEThreadLocal
- OETryMutex
- oeifstream
- oeigzstream
- oeiofstream
- oeisstream
- oeistdstream
- oeistream
- oeiwrapperstream
- oemultiostream
- oeofstream
- oeogzstream
- oeosstream
- oeostdstream
- oeostream
- oeowrapperstream
- oestream
- OEPlatform Constants
- OEPlatform Functions
- OEAddLicenseData
- OEAddLicenseFromHttp
- OEAddLicenseKey
- OEBigEndian
- OECloseIStream
- OECloseOStream
- OECompressionAvailable
- OECompress
- OECreateDirectory
- OECurrentTime
- oeendl
- oeends
- oeflush
- OEFileCorrectSeparators
- OEFileCreate
- OEFileDelete
- OEFileDetermineName
- OEFileDeterminePathAndName
- OEFileDeterminePath
- OEFileExists
- OEFileIsDirectory
- OEFileIsFile
- OEFileIsLink
- OEFileIsReadable
- OEFileIsWritable
- OEFileRandomName
- OEFileSize
- OEFileTempDescriptor
- OEFileTempDirectory
- OEFileTempPath
- OEGetAbsolutePath
- OEGetAllocaThreshold
- OEGetCurrentWorkingDirectory
- OEGetDomainName
- OEGetHostIdent
- OEGetHostName
- OEGetIPAddress
- OEGetMachineName
- OEGetNumProcessors
- OEGetPlatformInfo
- OEGetProcessMemUsage
- OEGetProcessorInfo
- OEGetTimeOfDay
- OEGetUserAppDataDir
- OEGetUserDocumentsDir
- OEGetUserHomeDir
- OEGetUserName
- OEIsNaN
- OEIsNormalNum
- OELocalTime
- OEOpenIStream
- OEOpenOStream
- OEProcessFileName
- OEProcessSystemCommand
- OERegisterIStream
- OERegisterOStream
- OERenameFile
- OESetAllocaThreshold
- OESetLicenseFile
- OESleep
- OEToolkitsGetRelease
- OEUncompress
- OEUnlinkDirectory
- OEUnlink
OEMath API¶
- OEMath Classes
- OEMath Constants
- OEMath Functions
- OEBoxArea
- OEBoxExtend
- OEBoxTranslate
- OEBoxVolume
- OEBoxXDim
- OEBoxXMid
- OEBoxYDim
- OEBoxYMid
- OEBoxZDim
- OEBoxZMid
- OECenter
- OEGeom2DAdd
- OEGeom2DAngle
- OEGeom2DCopy
- OEGeom2DDistance
- OEGeom2DDistance2
- OEGeom2DDotProd
- OEGeom2DMagnitude
- OEGeom2DMidpoint
- OEGeom2DNormalize
- OEGeom2DRotate
- OEGeom2DScale
- OEGeom2DSetLength
- OEGeom2DSubtract
- OEGeom2DTranslate
- OEGeom3DAbsTorsion
- OEGeom3DAdd
- OEGeom3DAllZero
- OEGeom3DAngle
- OEGeom3DAngleCoord
- OEGeom3DCopy
- OEGeom3DCrossProd
- OEGeom3DDistance
- OEGeom3DDistance2
- OEGeom3DDotProd
- OEGeom3DEulerRotate
- OEGeom3DEulerToQuaternion
- OEGeom3DEulerToRotMatrix
- OEGeom3DGetCenterAndExtents
- OEGeom3DGetCenterOfMass
- OEGeom3DMagnitude
- OEGeom3DMakeQuaternion
- OEGeom3DMatrixIdentity
- OEGeom3DMatrixInvert
- OEGeom3DMatrixMultiply
- OEGeom3DMatrixTranspose
- OEGeom3DNormalize
- OEGeom3DNormalizeQuaternion
- OEGeom3DPlanarCoord
- OEGeom3DQuaternionIdentity
- OEGeom3DQuaternionInvert
- OEGeomQuaternionMultiply
- OEGeom3DQuaternionRotate
- OEGeom3DQuaternionToRotMatrix
- OEGeom3DReflect
- OEGeom3DReflectCoord
- OEGeom3DRotVectorToTransform
- OEGeom3DRotate
- OEGeom3DScale
- OEGeom3DSetLength
- OEGeom3DSubtract
- OEGeom3DTetraCoord
- OEGeom3DTorsion
- OEGeom3DTranslate
- OEGeom3DUnitQuaternionRotate
- OEGeom3DVolume
- OEGeomDotProd
- OEGeomNormalizeQuaternion
- OEGeomQuaternionMultiply
- OEInBox
- OEInSphere
- OESetupBox
- OESetupBoxCenterAndExtents
- OESphereArea
- OESphereVolume
OEBio API¶
- OEBio Classes
- OEAltGroup
- OEAltLocation
- OEAltLocationFactory
- OEAltLocationState
- OEAtomMatchResidue
- OEAtomMatchResidueID
- OECationPiInteractionHint
- OEChelatorInteractionHint
- OEClashInteractionHint
- OEContactInteractionHint
- OECovalentInteractionHint
- OECrystalSymmetryParams
- OEDesignUnit
- OEHalogenBondInteractionHint
- OEHasAlternateLocation
- OEHasInteractionHint
- OEHasInteractionHintType
- OEHasPDBAtomIndex
- OEHasResidueInteractionHint
- OEHasSecondaryStructure
- OEHBondInteractionHint
- OEHierChain
- OEHierFragment
- OEHierResidue
- OEHierView
- OEInteractionHint
- OEInteractionHintComponentTypeBase
- OEInteractionHintContainer
- OEInteractionHintFragment
- OEInteractionHintTypeBase
- OEIridiumData
- OEIsAlphaCarbon
- OEIsBackboneAtom
- OEIsCationPiInteractionHint
- OEIsChelatorInteractionHint
- OEIsClashInteractionHint
- OEIsContactInteractionHint
- OEIsCovalentInteractionHint
- OEIsCTerminalAtom
- OEIsDisulfideBond
- OEIsHalogenBondInteractionHint
- OEIsHBondInteractionHint
- OEIsHetAtom
- OEIsInterInteractionHint
- OEIsIntermolecularChelatorInteractionHint
- OEIsIntermolecularHBondInteractionHint
- OEIsIntraInteractionHint
- OEIsIntramolecularChelatorInteractionHint
- OEIsIntramolecularHBondInteractionHint
- OEIsNonIdealHBondInteractionHint
- OEIsNTerminalAtom
- OEIsNucleicAcidBase
- OEIsNucleicAcidPhosphate
- OEIsNucleicAcidSugar
- OEIsSaltBridgeInteractionHint
- OEIsStackingInteractionHint
- OEIsStandardAminoAcid
- OEIsStandardNucleicAcid
- OEIsUnpairedLigandInteractionHint
- OEIsUnpairedProteinInteractionHint
- OEIsWater
- OELigandInteractionHintComponent
- OEMolComplexCategorizer
- OEMolComplexCategorizerBase
- OEMolComplexFilter
- OEPerceiveInteractionOptions
- OEPlaceHydrogensDetails
- OEPlaceHydrogensMoverNote
- OEPlaceHydrogensOptions
- OEProteinInteractionHintComponent
- OERamachandranAnalysis
- OEResidueCategoryData
- OERotamer
- OESaltBridgeInteractionHint
- OESequenceAlignment
- OESplitMolComplexOptions
- OEStackingInteractionHint
- OEStructureQuality
- OEBio Constants
- OEAltLocFactOption
- OEAssumption
- OECationPiInteractionHintType
- OEChelatorInteractionHintType
- OEDesignUnitComponents
- OEDesignUnitFileType
- OEHalogenBondInteractionHintType
- OEHBondInteractionHintType
- OEIridiumCategory
- OEMakeAltMolOption
- OEMolComplexData
- OEMolComplexFilterCategory
- OEPlaceHydrogensMoverClass
- OEPlaceHydrogensWaterProcessing
- OEProtTorType
- OERamaCategory
- OERamaType
- OEResidueDatabaseCategory
- OERotamerLibrary
- OESaltBridgeInteractionHintType
- OESecondaryStructure
- OESeqAlignmentMethod
- OESplitMolComplexParam
- OESplitMolComplexSetup
- OEStackingInteractionHintType
- OEBio Functions
- OEBuildUnitCell
- OECalculateDPI
- OEClearMolComplexSDData
- OEClearPlaceHydrogensMetadata
- OECombineMolComplexFragments
- OEConfigureSplitMolComplexOptions
- OECopyCrystalSymmetry
- OECountMolComplexSites
- OEExpandCrystalSymmetry
- OEFilterMolComplexFragments
- OEGetActiveSiteInteractionHintTypes
- OEGetAlignmentMethodName
- OEGetAlignment
- OEGetAlignments
- OEGetAtomMatchResidueIDs
- OEGetCalculatedInteractionGeometries
- OEGetChis
- OEGetCrystalSymmetry
- OEGetDesignUnitComponentID
- OEGetDesignUnitComponentName
- OEGetDesignUnitComponentNamesFromMask
- OEGetInteractions
- OEGetIridiumCategoryFromName
- OEGetIridiumCategoryName
- OEGetMolComplexComponents
- OEGetMolComplexFilterCategoryName
- OEGetMolComplexFragments
- OEGetPhi
- OEGetPlaceHydrogensMetadata
- OEGetPlaceHydrogensMoverClassName
- OEGetProteinTorsionName
- OEGetPsi
- OEGetRamachandranCategoryName
- OEGetRamachandranTypeName
- OEGetResidueAtom
- OEGetResidueAtoms
- OEGetResidueDatabaseCategoryName
- OEGetResidues
- OEGetRotamers
- OEGetSecondaryStructureID
- OEGetSecondaryStructureName
- OEGetSecondaryStructureStrandID
- OEGetSecondaryStructureType
- OEGetSimpleAlignment
- OEGetSpaceGroupNumber
- OEGetSpaceGroup
- OEGetTorsion
- OEHasBondedResidues
- OEHasCrystalSymmetry
- OEHasPlaceHydrogensMetadata
- OEIsReadableDesignUnit
- OEIsStandardNucleicAcidResidue
- OEIsStandardProteinResidue
- OEIsTypicalPrimaryLocationCode
- OEIsValidActiveSite
- OEIsWriteableDesignUnit
- OEMolComplexChainRoleFactory
- OEMolComplexFilterFactory
- OEMolComplexModelRoleFactory
- OEMolComplexOrderRoleFactory
- OEMolComplexRoleFactory
- OEMolComplexSiteRoleFactory
- OEMolComplexSurfaceWatersRoleFactory
- OEPerceiveInteractionHints
- OEPerceiveSecondaryStructure
- OEPlaceHydrogens
- OEReadDesignUnit
- OERMSD
- OERoleMolComplexFilterFactory
- OESecondaryStructurePacked
- OESetCrystalSymmetry
- OESetRotamer
- OESetTorsion
- OESetupSplitMolComplexOptions
- OESplitMolComplex
- OESubsetDesignUnit
- OESwapAIEResidueAtoms
- OESymmetryCartesianToFractional
- OESymmetryFractionalToCartesian
- OEWriteAlignment
- OETransformDesignUnit
- OEUpdateDesignUnit
- OEWriteDesignUnit