OESuperposeMethodΒΆ

Attention

This API is currently available in C++ and Python.

This namespace contains constants for superpositioning methods.

See also

Code Example

Default

The default superpositioning method is OESuperposeMethod:GlobalCarbonAlpha.

GlobalCarbonAlpha

Calculate superposition using the all matched alpha carbon atoms.

Global

Alias for OESuperposeMethod:Global.

SiteSequence

Calculate superposition using the input site residues. Site residues must be set with the OESuperpose::SetupRef member function of the OESuperpose class.

Site

Alias for OESuperposeMethod:SiteSequence.

DifferenceDistanceMatrix

Calculate superposition using the Distance Difference Matrix method.

DDM

Alias for OESuperposeMethod:DifferenceDistanceMatrix.

WeightedDifferenceDistanceMatrix

Calculate a weighted superposition using weights taken from the Difference Distance Matrix.

Weighted

Alias for OESuperposeMethod:WeightedDifferenceDistanceMatrix.

SecondaryStructureElements

Calculate superposition using an overlap of Secondary Structure Elements.

See also

SSE

Alias for OESuperposeMethod:SecondaryStructureElements.

Undefined

Superposition method is undefined. No superposition will take place.