OESuperposeMethodΒΆ
Attention
This API is currently available in C++ and Python.
This namespace contains constants for superpositioning methods.
See also
OESuperposeOptions
class
Code Example
Calculating superposition example
Default
The default superpositioning method is
OESuperposeMethod:GlobalCarbonAlpha
.
GlobalCarbonAlpha
Calculate superposition using the all matched alpha carbon atoms.
Global
Alias for OESuperposeMethod:Global
.
SiteSequence
Calculate superposition using the input site residues. Site residues must be set with the
OESuperpose::SetupRef
member function of the OESuperpose
class.
Site
Alias for OESuperposeMethod:SiteSequence
.
DifferenceDistanceMatrix
Calculate superposition using the Distance Difference Matrix method.
DDM
Alias for OESuperposeMethod:DifferenceDistanceMatrix
.
WeightedDifferenceDistanceMatrix
Calculate a weighted superposition using weights taken from the Difference Distance Matrix.
Weighted
Alias for OESuperposeMethod:WeightedDifferenceDistanceMatrix
.
SecondaryStructureElements
Calculate superposition using an overlap of Secondary Structure Elements.
See also
SSE
Alias for OESuperposeMethod:SecondaryStructureElements
.
SiteHopper
Calculates the superpostion using SiteHopper
See also
Undefined
Superposition method is undefined. No superposition will take place.