Bibliography

[Gilson-1988]
M. Gilson, K.A. Sharp, and B. Honig,
Calculating the electrostatic potential of molecules in solution: Method and error assessment,
Journal of Computational Chemistry, Vol. 9 (4), pp. 327-335, 1988.
[Grant-2001]
J.A. Grant, B. Pickup, and A. Nicholls,
A smooth permittivity function for Poisson–Boltzmann solvation methods,
Journal of Computational Chemistry, Vol. 22 (6), pp. 608-640, 2001.
[Nicholls-2008]
A. Nicholls, D.L. Mobley, J.P. Guthrie, J.D. Chodera, C.I. Bayly, M.D. Cooper and V.S. Pande,
Predicting Small-Molecule Solvation Free Energies: an Informal Blind Test for Computational Chemistry,
Journal of Medicinal Chemistry, Vol. 51 (4), pp. 769-779, 2008.
[Nicholls-2009]
A. Nicholls, S. Wlodek and J.A. Grant,
The SAMP1 Solvation Challenge: Further Lessons Regarding the Pitfalls of Parametrization,
Journal of Physical Chemistry B, Vol. 113 (14), pp. 4521-4532, 2009.
[reduce]
Reduce Software for Adding Hydrogens, accessed January 2014,
[Sharp-1990]
K.A. Sharp, and B. Honig,
Electrostatic Interactions in Macromolecules: Theory and Applications,
Annual Review of Biophysics & Biophysical Chemistry, Vol. 19, pp. 301-332, 1990.
[Sharp-1991]
K.A. Sharp, A. Nicholls, R.F. Fine and B. Honig,
Reconciling the Magnitude of the Microscopic and Macroscopic Hydrophobic Effects,
SCIENCE, Vol. 252 (5002), pp. 106-109, 1991.
[Word-1999]
J.M. Word, S.C. Lovell, J.S. Richardson and D.C. Richardson,
Asparagine and Glutamine: Using Hydrogen Atom Contacts in the Choice of Sidechain Amide Orientation,
Journal of Molecular Biology, Vol. 285, pp. 1735-1747, 1999.