OEFastaToMolΒΆ
bool OEFastaToMol(OEMolBase &mol, const std::string &str)
Converts a FASTA sequence into a molecule.
The following code demonstrates how to create a molecule from a FASTA sequence using the OEFastaToMol function and prints out the number of alpha carbon atoms in the molecule.
OEGraphMol mol = new OEGraphMol();
OEChem.OEFastaToMol(mol, "AVILMPTWSTNQCGPRHKDE");
Console.WriteLine(OEChem.OECount(mol, new OEIsCAlpha()));
See also
- OEReadFASTAFile function