Enumerate Pockets on Design Units

Category Paths

Follow one of these paths in the Orion user interface, to find the floe.

  • Product-based/SPRUCE

  • Role-based/Computational Chemist

  • Solution-based/Virtual-screening/Target Preparation

  • Solution-based/Hit to Lead/Target Preparation/Structural Data Preparation

  • Task-based/Target Prep & Analysis/Protein Preparation

Description

This floe uses OEPocket to detect pockets on a protein surface and enumerate them into OEDesignUnits with the binding sites focused on these discovered pockets.

Titles of required parameters (promoted names)

  • Failure Dataset (data_out) type: dataset_out: Dataset with design unit that failed to be successfully modelled.
    Default: failed_EnumeratePocketsOnDesignUnit
  • Output Dataset (data_out) type: dataset_out: Dataset with modelled design unit.
    Default: EnumeratePocketsOnDesignUnit
  • Input Design Unit (data_in) type: data_source: Dataset with design unit(s) to be modelled