BROOD - Query Builder¶
Category Paths
Follow one of these paths in the Orion user interface, to find the floe.
Product-based/BROOD
Role-based/Computational Chemist
Solution-based/Virtual-screening/DB Search
Task-based/Scaffold-Hopping
Role-based/Medicinal Chemist
Description
BROOD - Query Generator is a tool for creating a Brood Query, that can be used with the BROOD - 3D Fragment Replacement floe to generate bioisosteric analogs by replacing specified portions of the Query with fragments that have similar shape and electrostatics, but with potentially novel connectivity and chemistry.
Promoted Parameters
Title in user interface (promoted name)
Inputs
Query Input (ui_result): Must be a query with valid 3D coordinates
Required
Type: fragment_input
Outputs
Query output (data_out): Output dataset containing BROOD query
Required
Type: dataset_out
Default: Output BROOD query