MMDS 01b. Update Proasis PDB CollectionΒΆ

Category Paths

  • Product-based/SPRUCE

  • Product-based/MMDS

  • Role-based/MMDS Staff User/MMDS Data Prep

  • Solution-based/Virtual-screening/Target Preparation

  • Solution-based/Hit to Lead/Target Preparation

  • Solution-based/Hit to Lead/Target Preparation/Structural Data Preparation

  • Task-based/Target Prep & Analysis/Protein Preparation

Description

MMDS 01b. Update Proasis PDB Collection updates PDB codes from the Proasis collection

Parameter title in user interface (promoted name)

  • Collection Name (coll_name) type: string: Name of a new or existing collection for biomolecular source data.For existing collections, an ID can also be used. When supplying a name of an existing collection the latest with that name is updated (if multiple exist).
    Default: Proasis PDB Collection

Parameter title in user interface (promoted name)

Parameter title in user interface (promoted name)

  • Proasis Server Version (server_version) type: string: Proasis server version, e.g. vX.Y
    Default: v1.4

Parameter title in user interface (promoted name)

  • Output Dataset (data_out) type: dataset_out: Output dataset to write to
    Default: retrieve_failures

Parameter title in user interface (promoted name)

  • Recent number of days (recent_range) type: integer: How many days past to check for recent structures in Proasis
    Default: 7

Parameter title in user interface (promoted name)

Parameter title in user interface (promoted name)

  • Proasis Server Version (server_version) type: string: Proasis server version, e.g. vX.Y
    Default: v1.4