OEIsNucleicAcidBase

class OEIsNucleicAcidBase : public OESystem::OEUnaryPredicate<OEChem::OEAtomBase>

This class represents OEIsNucleicAcidBase functor that identifies nucleic acid base atoms (OEAtomBase).

See also

• OEGetPDBAtomIndex function

• Residue Data Functors section

• OEIsNucleicAcidSugar predicate

• OEIsNucleicAcidPhosphate predicate

The following methods are publicly inherited from OEUnaryPredicate:

operator()

CreateCopy

CreatePredicateCopy

The following methods are publicly inherited from OEUnaryFunction:

operator()

CreateCopy

operator()

bool operator()(const OEChem::OEAtomBase &atom) const

Returns true, if the atom read from a pdb file with the following pdb atom names:

• OEPDBAtomName::C2, OEPDBAtomName::C5, OEPDBAtomName::C6, OEPDBAtomName::C8

• OEPDBAtomName::N1, OEPDBAtomName::N2, OEPDBAtomName::N3, OEPDBAtomName::N4, OEPDBAtomName::N6, OEPDBAtomName::N7, OEPDBAtomName::N9

• OEPDBAtomName::O2, OEPDBAtomName::O4, OEPDBAtomName::O6

CreateCopy

OESystem::OEUnaryFunction<OEChem::OEAtomBase, bool> *CreateCopy() const

Deep copy constructor that returns a copy of the object. The memory for the returned OEIsNucleicAcidBase object is dynamically allocated and owned by the caller.

The returned copy should be deallocated using C++ delete operator in order to prevent a memory leak.