-fit
<filename>
File containing the 3D biomolecules that will be structurally superposed.
File format for -fit can be one of:
File type
Extension
OEDesignUnit
.oedu
OEBinary
.oeb .oeb.gz
PDB
.pdb .ent .pdb.gz .ent.gz
mmCIF
.cif .cif.gz
-ref
File containing the 3D biomolecules that will act as the reference for the structural superposition.
File format for -ref can be one of: