Required Parameters

-query

Inputs the query or reference molecule.

-in

-dbase

Inputs file containing one or more 3D molecules to overlay and score against a reference or query molecule.

File format for -in can be one of:

File type	Extension
OEBinary	.oeb .oeb.gz .oez
SDF	.sdf .mol .sdf.gz
MOL2	.mol2 .mol2.gz